ecoli.composites.chemotaxis_minimal

Minimal E. coli Chemotaxis

class ecoli.composites.chemotaxis_minimal.ChemotaxisMinimal(config)

Bases: Composer

Chemotaxis Minimal Composite

A chemotactic cell with only receptor and coarse motor processes.

defaults: Dict[str, Any]

{   'boundary_path': ('boundary',),
    'initial_ligand': 0.1,
    'ligand_id': 'MeAsp',
    'motor': {},
    'receptor': {}}

generate_processes(config)

generate_topology(config)

name = 'chemotaxis_minimal'

ecoli.composites.chemotaxis_minimal.main()