reconstruction.ecoli.scripts.update_biocyc_files

Pulls the lastest versions of the raw data files that are sourced from BioCyc/EcoCyc from their webservices server and updates the local versions of the files under reconstruction/ecoli/flat.

reconstruction.ecoli.scripts.update_biocyc_files.parse_args()

Parses command line arguments.

Returns:

parsed arguments and values

Return type:

argparse.Namespace object

reconstruction.ecoli.scripts.update_biocyc_files.update_biocyc_files(preview=False)