Source code for reconstruction.ecoli.dataclasses.process.chromosome_structure

"""
SimulationData for the ChromosomeStructure process
"""


[docs] class ChromosomeStructure(object): """ SimulationData for the ChromosomeStructure process """ def __init__(self, raw_data, sim_data): self._build_supercoiling_parameters(raw_data, sim_data)
[docs] def _build_supercoiling_parameters(self, raw_data, sim_data): """ Load parameters used for DNA supercoiling from raw_data. """ for name, value in raw_data.dna_supercoiling.items(): self.__setattr__(name, value) # Unique index used for dummy molecule at terC self.terC_dummy_molecule_index = -1