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Vivarium E. coli
  • API Reference
  • reconstruction
  • reconstruction.ecoli
  • reconstruction.ecoli.scripts
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reconstruction.ecoli.scripts

  • reconstruction.ecoli.scripts.fold_changes
    • reconstruction.ecoli.scripts.fold_changes.calculate_fc
  • reconstruction.ecoli.scripts.metabolism_kinetics
    • reconstruction.ecoli.scripts.metabolism_kinetics.convert_to_flat
  • reconstruction.ecoli.scripts.metabolite_concentrations
    • reconstruction.ecoli.scripts.metabolite_concentrations.convert_to_flat
    • reconstruction.ecoli.scripts.metabolite_concentrations.merge_files
  • reconstruction.ecoli.scripts.protein_half_lives
    • reconstruction.ecoli.scripts.protein_half_lives.convert_to_flat
  • reconstruction.ecoli.scripts.rna_half_lives
    • reconstruction.ecoli.scripts.rna_half_lives.convert_to_flat
  • reconstruction.ecoli.scripts.update_biocyc_files
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