ecoli
ecoli.analysisecoli.analysis.antibiotics_colonyecoli.analysis.antibiotics_colony.amp_plotsecoli.analysis.antibiotics_colony.explorationecoli.analysis.antibiotics_colony.load_dataecoli.analysis.antibiotics_colony.metricsecoli.analysis.antibiotics_colony.plotecoli.analysis.antibiotics_colony.plot_utilsecoli.analysis.antibiotics_colony.snapshot_and_hist_plotecoli.analysis.antibiotics_colony.spatial_correlationecoli.analysis.antibiotics_colony.tet_dry_massecoli.analysis.antibiotics_colony.timeseriesecoli.analysis.antibiotics_colony.validation
ecoli.analysis.causality_networkecoli.analysis.colonyecoli.analysis.multidaughterecoli.analysis.multiexperimentecoli.analysis.multigenerationecoli.analysis.multigeneration.new_gene_countsecoli.analysis.multigeneration.replicationecoli.analysis.multigeneration.ribosome_componentsecoli.analysis.multigeneration.ribosome_crowdingecoli.analysis.multigeneration.ribosome_productionecoli.analysis.multigeneration.ribosome_usageecoli.analysis.multigeneration.rna_decay_03_high
ecoli.analysis.multiseedecoli.analysis.multivariantecoli.analysis.single
ecoli.compositesecoli.experimentsecoli.libraryecoli.library.cell_wallecoli.library.create_timelineecoli.library.data_predicatesecoli.library.initial_conditionsecoli.library.json_stateecoli.library.kinetic_rate_lawsecoli.library.lattice_utilsecoli.library.logging_toolsecoli.library.parametersecoli.library.parquet_emitterecoli.library.pymunk_multibodyecoli.library.schemaecoli.library.serializeecoli.library.sim_dataecoli.library.test_parquet_emitterecoli.library.unitsecoli.library.updaters
ecoli.processesecoli.processes.chemotaxisecoli.processes.environmentecoli.processes.environment.derive_globalsecoli.processes.environment.diffusion_fieldecoli.processes.environment.exchangeecoli.processes.environment.exchange_dataecoli.processes.environment.field_timelineecoli.processes.environment.local_fieldecoli.processes.environment.lysisecoli.processes.environment.media_updateecoli.processes.environment.multibody_physicsecoli.processes.environment.reaction_diffusion_field
ecoli.processes.listenersecoli.processes.listeners.RNA_countsecoli.processes.listeners.aggregatorecoli.processes.listeners.dna_supercoilingecoli.processes.listeners.mass_listenerecoli.processes.listeners.monomer_countsecoli.processes.listeners.replication_dataecoli.processes.listeners.ribosome_dataecoli.processes.listeners.rna_synth_probecoli.processes.listeners.rnap_dataecoli.processes.listeners.unique_molecule_counts
ecoli.processes.membraneecoli.processes.spatialityecoli.processes.stubsecoli.processes.allocatorecoli.processes.bulk_timelineecoli.processes.cell_divisionecoli.processes.chemostatecoli.processes.chromosome_replicationecoli.processes.chromosome_structureecoli.processes.complexationecoli.processes.concentrations_deriverecoli.processes.division_detectorecoli.processes.engine_processecoli.processes.enzyme_kineticsecoli.processes.equilibriumecoli.processes.global_clockecoli.processes.metabolismecoli.processes.metabolism_reduxecoli.processes.metabolism_redux_classicecoli.processes.partitionecoli.processes.polypeptide_elongationecoli.processes.polypeptide_initiationecoli.processes.protein_degradationecoli.processes.registriesecoli.processes.rna_degradationecoli.processes.rna_interferenceecoli.processes.rna_maturationecoli.processes.shapeecoli.processes.tf_bindingecoli.processes.tf_unbindingecoli.processes.transcript_elongationecoli.processes.transcript_initiationecoli.processes.two_component_systemecoli.processes.unique_update
ecoli.variants