ecoli.analysis.antibiotics_colony.snapshot_and_hist_plot
- ecoli.analysis.antibiotics_colony.snapshot_and_hist_plot.get_data(experiment_id, time, molecules, host, port, cpus, verbose)[source]
- ecoli.analysis.antibiotics_colony.snapshot_and_hist_plot.make_snapshot_and_hist_plot(timepoint_data, metadata, bounds, molecule, title=None, tag_hsv=[0.6, 1, 1])[source]
Generates a figure with a snapshot plot tagging the specified molecule, and a smoothed density plot (using histogram) of the distribution of counts for that molecule at that time. :param timepoint_data: data from one timepoint, in the form {time : {…data…}} :param bounds: physical bounds for the snapshot plot :param molecule: molecule to tag in the snapshot plot / histogram plot.
- Returns:
fig, axes