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ecoli.analysis

  • ecoli.analysis.causality_network
    • ecoli.analysis.causality_network.buildCausalityNetwork
    • ecoli.analysis.causality_network.build_network
    • ecoli.analysis.causality_network.network_components
    • ecoli.analysis.causality_network.read_dynamics
  • ecoli.analysis.colony
    • ecoli.analysis.colony.snapshots
  • ecoli.analysis.multidaughter
  • ecoli.analysis.multiexperiment
  • ecoli.analysis.multigeneration
    • ecoli.analysis.multigeneration.new_gene_counts
    • ecoli.analysis.multigeneration.replication
    • ecoli.analysis.multigeneration.ribosome_components
    • ecoli.analysis.multigeneration.ribosome_crowding
    • ecoli.analysis.multigeneration.ribosome_production
    • ecoli.analysis.multigeneration.ribosome_usage
    • ecoli.analysis.multigeneration.rna_decay_03_high
  • ecoli.analysis.multiseed
    • ecoli.analysis.multiseed.ecocyc_table
    • ecoli.analysis.multiseed.protein_counts_validation
    • ecoli.analysis.multiseed.ribosome_spacing
    • ecoli.analysis.multiseed.subgenerational_expression_table
  • ecoli.analysis.multivariant
    • ecoli.analysis.multivariant.average_monomer_counts
    • ecoli.analysis.multivariant.cell_mass
    • ecoli.analysis.multivariant.doubling_time_hist
    • ecoli.analysis.multivariant.doubling_time_line
    • ecoli.analysis.multivariant.dummy
    • ecoli.analysis.multivariant.new_gene_translation_efficiency_heatmaps
  • ecoli.analysis.single
    • ecoli.analysis.single.blame
    • ecoli.analysis.single.centralCarbonMetabolismScatter
    • ecoli.analysis.single.mass_fraction_summary
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