Vivarium E. coli
  • Stores
  • Processes
  • Composites
  • Experiments
  • Workflows
  • Experimental Data Ingestion
  • Output
  • Tutorial
  • Contributing
  • Documentation
  • HPC Clusters
  • Google Cloud
  • Amazon Web Services
  • Continuous Integration
  • PyCharm Setup
  • Model Differences From wcEcoli
  • API Reference
    • ecoli
      • ecoli.analysis
        • ecoli.analysis.causality_network
        • ecoli.analysis.colony
        • ecoli.analysis.multidaughter
        • ecoli.analysis.multiexperiment
        • ecoli.analysis.multigeneration
        • ecoli.analysis.multiseed
        • ecoli.analysis.multivariant
        • ecoli.analysis.single
      • ecoli.composites
      • ecoli.experiments
      • ecoli.library
      • ecoli.processes
      • ecoli.variants
    • reconstruction
    • runscripts
    • validation
    • wholecell
Vivarium E. coli
  • API Reference
  • ecoli
  • ecoli.analysis
  • ecoli.analysis.multigeneration
  • View page source

ecoli.analysis.multigeneration

Folder containing analysis scripts that expect to read data for all cells across many generations with the same experiment ID (same workflow run), same initial seed, and same variant simulation data object.

  • ecoli.analysis.multigeneration.new_gene_counts
  • ecoli.analysis.multigeneration.replication
  • ecoli.analysis.multigeneration.ribosome_components
  • ecoli.analysis.multigeneration.ribosome_crowding
  • ecoli.analysis.multigeneration.ribosome_production
  • ecoli.analysis.multigeneration.ribosome_usage
  • ecoli.analysis.multigeneration.rna_decay_03_high
  • ecoli.analysis.multigeneration.selected_fluxes
Previous Next

© Copyright 2021-2026, The Vivarium E. coli Authors.

Built with Sphinx using a theme provided by Read the Docs.