ecoli
ecoli.analysis
ecoli.analysis.antibiotics_colony
ecoli.analysis.causality_network
ecoli.analysis.colony
ecoli.analysis.multidaughter
ecoli.analysis.multiexperiment
ecoli.analysis.multigeneration
ecoli.analysis.multiseed
ecoli.analysis.multivariant
ecoli.analysis.single
ecoli.composites
ecoli.experiments
ecoli.library
ecoli.processes
ecoli.variants
reconstruction
runscripts
validation
wholecell
ecoli.analysis.multiseed.ecocyc_table
Generates tables of data to share with EcoCyc for display on the “modeling” tab.
params (dict[str, Any])
conn (DuckDBPyConnection)
history_sql (str)
config_sql (str)
sim_data_dict (dict[str, dict[int, str]])
validation_data_paths (list[str])
outdir (str)
variant_metadata (dict[str, dict[int, Any]])
variant_names (dict[str, str])
values (list[polars.Series])