ecoli.processes.division_detector
- class ecoli.processes.division_detector.DivisionDetector(config)[source]
Bases:
Step
Calculates division threshold for inner simulation in EngineProcess. Upon reaching threshold, sets a flag through the division_trigger port that can be detected via a tunnel and used to initiate division.
By default, we forgo the dry mass threshold in favor of a boolean threshold set by the MarkDPeriod Step in ecoli.processes.cell_division. Users can revert to the mass threshold by setting d_period to False in their config json.
-
defaults: Dict[str, Any]
{ 'chromosome_path': None, 'division_mass_multiplier': 1, 'division_threshold': None, 'division_variable': None, 'dry_mass_inc_dict': None}
- name = 'division-detector'
-
defaults: Dict[str, Any]