ecoli.processes.listeners.RNA_counts

RNA Counts Listener

class ecoli.processes.listeners.RNA_counts.RNACounts(parameters=None)

Bases: Step

Listener for the counts of each mRNA and rRNA transcription units and

cistrons. Includes the counts of both partial and full transcripts.

defaults: Dict[str, Any] = {'emit_unique': False, 'mrna_indexes': [], 'rna_ids': [], 'time_step': 1}

name = 'RNA_counts_listener'

next_update(timestep, states)

ports_schema()

topology = {'RNAs': ('unique', 'RNA'), 'global_time': ('global_time',), 'listeners': ('listeners',), 'timestep': ('timestep',)}

update_condition(timestep, states)