ecoli.processes.listeners.ribosome_data

Ribosome Data Listener

class ecoli.processes.listeners.ribosome_data.RibosomeData(parameters=None)

Bases: Step

Listener for ribosome data.

defaults: Dict[str, Any] = {'emit_unique': False, 'n_monomers': [], 'rRNA_cistron_tu_mapping_matrix': [], 'rRNA_is_16S': [], 'rRNA_is_23S': [], 'rRNA_is_5S': [], 'time_step': 1}

name = 'ribosome_data_listener'

next_update(timestep, states)

ports_schema()

topology = {'RNAs': ('unique', 'RNA'), 'active_ribosomes': ('unique', 'active_ribosome'), 'global_time': ('global_time',), 'listeners': ('listeners',), 'next_update_time': ('next_update_time', 'ribosome_data_listener'), 'timestep': ('timestep',)}

update_condition(timestep, states)

See update_condition().